BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024H07LP1|AL428292
(943 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1700 1821 0.0
>3x_Contig1700
Length = 16332
Score = 1821 bits (916), Expect = 0.0
Identities = 934/943 (99%)
Strand = Plus / Minus
Query: 1 gatccattccatgagtnacagtagatcgttagggaacccaacagacaagaaccctagtgg 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1416 gatccattccatgagtaacagtagatcgttagggaacccaacagacaagaaccctagtgg 1357
Query: 61 caccacaccaatgatacacctggtagaggtacgattcccgcagacaaacatatccacgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1356 caccacaccaatgatacacctggtagaggtacgattcccgcagacaaacatatccacgtt 1297
Query: 121 atataacgttgccaagagaccgtattgcgatatgtttctccaacagacgagccaatggta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1296 atataacgttgccaagagaccgtattgcgatatgtttctccaacagacgagccaatggta 1237
Query: 181 cgacattgccatcttcacagcatccatgaaagagtatgcagacccagtaatcgactggct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1236 cgacattgccatcttcacagcatccatgaaagagtatgcagacccagtaatcgactggct 1177
Query: 241 acaacagacgtgttcggtacagtttcactacagatggtatagagaagattgcacacttcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1176 acaacagacgtgttcggtacagtttcactacagatggtatagagaagattgcacacttcg 1117
Query: 301 gcctggcgtcggttacgtgaaggacatcggtaccgtggcaacccaaatcgaaacgtcacg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1116 gcctggcgtcggttacgtgaaggacatcggtaccgtggcaacccaaatcgaaacgtcacg 1057
Query: 361 tgacccctctcaaatgattatcattgataacagttctatcagctacgcaatgcatctgga 420
||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1056 tgacctctctcaaatgattatcattgataacagtcctatcagctacgcaatgcatctgga 997
Query: 421 caatgcaatacaagtacatggttggatcaacgatccaagcgactcggaactactacacct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 996 caatgcaatacaagtacatggttggatcaacgatccaagcgactcggaactactacacct 937
Query: 481 attgccactactaaaggccatgcgttacgtgacggactctcgctgtatacttgcactcaa 540
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 936 attgccactactaaaggccatgcgtcacgtgacggactctcgctgtatacttgcactcaa 877
Query: 541 atcaggtagagcatcgatctccaactaacagtgttattaccctgtccataatatagtact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 atcaggtagagcatcgatctccaactaacagtgttattaccctgtccataatatagtact 817
Query: 601 aatttgtagagatgcgaatatgtagacaagcgatttaggaaccgaaagtaatccctgaac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 aatttgtagagatgcgaatatgtagacaagcgatttaggaaccgaaagtaatccctgaac 757
Query: 661 cggcatccagaaaagaaaaagaaaagggctatgttcctccaattactccaattattccga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 cggcatccagaaaagaaaaagaaaagggctatgttcctccaattactccaattattccga 697
Query: 721 atgcacccgaacacccagacacgccactagtggcatacctcggatcagaccggatacgga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 atgcacccgaacacccagacacgccactagtggcatacctcggatcagaccggatacgga 637
Query: 781 atacatacgcgctgcgacactgctctccaattttccactgtwccacgtgacgcttgatag 840
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 636 atacatacgcgctgcgacactgctctccaattttccactgtaccacgtgacgcttgatag 577
Query: 841 tttttttttttttcttcactcctttcgrccacgcgctamtggatcttctgcggggaccgc 900
||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||
Sbjct: 576 tttttttttttttcttcactcctttcgaccacgcgctactggatcttctgcggcgaccgc 517
Query: 901 attctgttcttcctttctttccctcactttgatgcgattytaa 943
||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 516 attctgttcttcctttctttccctcactttgatgcgattctaa 474
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,566
Number of Sequences: 1807
Number of extensions: 12566
Number of successful extensions: 174
Number of sequences better than 1.0e-20: 1
length of query: 943
length of database: 10,358,551
effective HSP length: 16
effective length of query: 927
effective length of database: 10,329,639
effective search space: 9575575353
effective search space used: 9575575353
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)